About Tai-MOS

Introduction

In 2024, the National Science and Technology Council’s (NSTC) Department of Natural Sciences and Sustainable Development launched the Taiwan Marine Observatory System (Tai-MOS) to propel Taiwan’s oceanographic research forward. Together with the Ocean Research Vessel and Core Instrument Center and the Ocean Data Bank, Tai-MOS forms the bedrock of Taiwan’s foundational oceanographic research.

In its inaugural year, Academia Sinica’s Research Center for Critical Issues (RCCI) partnered with the Taiwan Ocean Research Institute (TORI) to set up the Tai-MOS Core Facility Headquarters at Academia Sinica’s South Campus in Tainan. Operations are overseen by a Scientific Steering Committee, which includes the Principal Investigator (PI), the oceanography discipline convener, and review committee members. Starting from the second year, the headquarters invites scientists to apply for Tai-MOS Branch Projects. This expansion will establish a dynamic network of observation stations dedicated to studying diverse ecological environments and tackling major scientific questions.

Time-series Station

Research Cruises

Core Laboratory

Ocean Data Bank

Tai-MOS is a long-term, hypothesis-driven research project focusing on variations in biogeochemical phenomena across different time scales within the upper water column (euphotic zone) of tropical oligotrophic oceans. The project conducts regular research cruises aboard the R/V Legend to the South-East Asia Time-series Station (SEATS; 18°N, 116°E). Following international protocols, the research team collects and analyzes samples at the Core Laboratory to measure key parameters. The resulting long-term time-series data are archived in the NSTC Ocean Data Bank, providing the academic community with an essential resource for studying long-term changes in the marine environment. To foster collaboration, available spots on these cruises are open to applicants from the wider oceanography community.

Tai-MOS serves four primary functions:

  1. Providing high-quality, long-term environmental data to support sustainability and climate change research.
  2. Attracting and enhancing interdisciplinary and international collaboration.
  3. Serving as a training platform for early-career researchers, including students and postdoctoral fellows.
  4. Strengthening partnerships between the NSTC and domestic marine-related institutions.

Branch Projects and Applications (Concluded in 2025)

Starting in the second year, Tai-MOS accepts applications for Branch Projects. The process begins with a public call for proposals issued to the academic community. Interested universities and research institutions are invited to submit a 1–2 page brief outlining long-term observational research on unique ecological systems or key marine science issues. The Headquarters Project assembles a Project Review Committee of domestic experts to evaluate presentations from applicants. Selected candidates will then submit formal project proposals, which require final approval from the Scientific Steering Committee to become official Tai-MOS Branch Projects.
Scientific Steering Committee (SSC): A standing committee composed of the discipline convener and review committee members. The SSC is responsible for supervising and advising on all operations executed by the General Project Office. Members serve a three-year term and are eligible for reappointment.
Project Review Committee (PRC): A specialized, task-driven committee that manages the preliminary evaluation of branch projects, including prospectus reviews and public briefings.
The memberships of these two committees may partially overlap but must remain distinct. Additionally, all proposals must comply with standard NSTC research grant formatting.

Research Vessel (R/V Legend)

aunched in 2017, the R/V Legend is owned by the NSTC and operated by the Taiwan Ocean Research Institute (TORI). The vessel measures 76 meters long by 16 meters wide, features a gross tonnage of 2,629 tons, and reaches speeds up to 12 knots. Built for extended missions, it can spend up to 30 days at sea with a full complement of 43 people (19 crew and 24 researchers). For more information:

South-East Asia Time-series Station

“Marine Time-series Research” refers to continuous, long-term investigations conducted at a specific location for at least ten years to track variations in marine phenomena across seasonal, interannual, and even centennial time scales. As part of the Joint Global Ocean Flux Study (JGOFS) time-series network, the South-East Asia Time-series Study (SEATS) was launched in 1997 by the National Center for Ocean Research (NCOR), with funding from the National Science and Technology Council (NSTC).

This multidisciplinary, multi-institutional project aims to directly observe variations in the marine carbon cycle and other biologically driven processes over interannual to decadal time scales. The SEATS station is situated in the deep waters (>3,800 meters) of the central-northern South China Sea (18°N, 166°E). It remains unique as the only international marine time-series site located within both a tropical region and a marginal sea.

Characterized by its unique ecology, SEATS features oligotrophic waters isolated from major Southeast Asian river runoff, persistently high sea surface temperatures with minimal seasonal variation, and strong water column stratification. Additionally, the site is defined by a shallow mixed layer and nutricline, a deep euphotic zone, distinct monsoon seasons, frequent typhoons, and high atmospheric aerosol deposition.

Major discoveries and achievements:

  • Wong et al., 2007.

    The South East Asian Time-series Study (SEATS) and the biogeochemistry of the South China Sea—An overview.

  • Tseng et al., 2007.

    Temporal variations in the carbonate system in the upper layer at the SEATS station.

  • Hou et al., 2020.

    Effects of Mixed Layer Depth on Phytoplankton Biomass in a Tropical Marginal Ocean: A Multiple Timescale Analysis.

  • Shih et al., 2021.

    Comparison of primary Production Using in situ and Satellite-Derived Values at the SEATS Station in the South China Sea.

  • Chen et al., 2021.

    Diel to Seasonal Variation of Picoplankton in the Tropical South China Sea.

  • Shiah et al., 2022.

    Viral Shunt in tropical oligotrophic ocean.

Core Laboratory

The Core Laboratory manages a broad spectrum of responsibilities, which are categorized into two operational tiers, Management and Execution.

The Management tier is overseen by three to four staff researchers. This team comprises a Principal Investigator (PI) who directs overall operations, one Scientist, and two Postdoctoral Researchers. Their specific responsibilities include:

  1. Overseeing execution-level operations, managing the allocation of research personnel (assistants), supervising measurement protocols and cruise schedules, and coordinating the laboratory’s various workspaces.
  2. Database management, strictly enforcing database policies and ensuring rigorous data quality control.
  3. Academic event planning and organizing both domestic and international academic activities.
  4. Project integration and coordinating sub-projects within the time-series research framework, as well as collaborating with domestic and international partner projects.


Beyond their operational duties, the Scientist and Postdoctoral roles serve as a career springboard, providing a professional buffer zone for researchers aspiring to pursue long-term careers in marine science.

At the Execution tier, technicians and research assistants focus primarily on data acquisition, processing, quality control, analysis, and archiving. To maintain rigorous data standards, the lead personnel (typically a senior assistant) must be highly proficient with sampling instruments—including CTD sensors, water samplers, and sediment traps. They must also be experts in measurement protocols for key environmental parameters (such as dissolved oxygen, salinity, and nutrients) and skilled in computerized data processing.

The three most critical responsibilities at this level are:

  1. Troubleshooting, resolving technical and operational issues across all data collection and processing workflows.
  2. Eliminating sampling and analytical errors, including those stemming from instrument drift or operator transitions (e.g., during shift handovers). To ensure accuracy, the use of certified reference materials (CRMs) for instrument calibration is strongly recommended for all measurement methods.
  3. Ensuring that data processing, quality inspection, and statistical analyses are completed immediately following each research cruise. Prompt turnaround prevents undetected issues—such as leaking water bottles or sensor drift—from compromising data quality on subsequent missions.

Core Water Column Parameters:

  • Manual Measurement Parameters: The 16 manual parameters listed in Table 1 are based on the experimental protocols established by JGOFS in 1996 (Knap et al., 1996) and are widely utilized by international marine time-series research stations. Currently, the four parameters that this project cannot accommodate (highlighted in red) are specialized research expertise of specific professors in Taiwan. In the future, these may be integrated into our routine parameters through collaborative initiatives. Table 2 lists the instrumentation and equipment currently available in the Core Laboratory.

Table 1: Marine Biogeochemical Core Parameters for Time-Series Research Defined by the International JGOFS.

編號 Number核心參數 Parameters
1CTD and Related Measurements
2Salinity Determination
3Dissolved Oxygen by the Winkler Procedure/Shibala method
4Total Inorganic Carbon by the Coulometeric Procedure
5Nitrite, Nitrate +Nitrite, Phosphate and Reactive Silicate by continuous Flow Analysis
6Measurement of Chlorophyll-a and Phaeopigments by Fluorometric Analysis
7Particulate Organic Carbon and Particulate Nitrogen
8Dissolved Organic Carbon by High Temperature Combustion/Direct Injection Technique
9JGOFS Sediment Trap Methods
10New Production by 15N-method
11Viruses and pico-plankton abundance by Flow Cytometry
12Primary Production by 14C-method
13Bacterial Production using Methyltritiated Thymidine
14Community Respiration by DO dark incubation method
15Microzooplankton Biomass
16Microzooplankton Herbivory

Table 2: Core Laboratory Instruments and Equipment Provided by RCEC, Academia Sinica.

No.EquipmentBrandModelAmountMeasurement Items
1Flow CytometerThermo-SciAttune Nxt1,800,000Microzooplankton Biomass
2Liquid Scintillation CounterPerkinElmerTri-Carb 4810TR2,550,000BP、PP
3Fluorescence MicroscopeCarl ZeissAxio Scope, A1650,000Bacteria Biomass
4SpectrophotometerShishin Tech.SP8001、SP830300,000Nutrients、DO
5Multi-channel Peristaltic PumpIsmatecIPC-8100,000Nutrients
6FluorometerTurner DesignsTrilogy300,000Chlorophyll-a
7High-Speed Refrigerated CentrifugeEppendorfCentrifuge 5810R400,000Chlorophyll-a、BP
8Vacuum Filtration SystemChrom TechDP-0225,000POC、DOC
9MicrobalanceMettler ToledoXP2U800,000TSM
10BalanceMettler ToledoML4002100,000Preparation
11CS AnalyzerHoribaEMIA Pro1,600,000POC
12TOC AnalyzerShimadzuTOC-LCPH1,500,000DOC
13Ultrapure Water SystemMilli-QIQ-7000+Ess 101,200,000Lab Water
14AutoclaveTominTM-32540,000Preparation
15Muffle FurnaceDeng YngDF30370,000POC、DOC
16Hot Air OvenDeng YngDO4535,000Preparation
17IncubatorDeagleLTI-60040,000Thermostatic Cultivation
18Ultrasonic BathDeltaDC-600H40,000Chlorophyll-a
19Water BathFirstekB402-L70,000Thermostatic Cultivation
20Bench pH MeterHoribaF-54BW20,000Water Quality Analysis
214oC refrigeratorRuey ShingRS-S3002F50,000Sample preservation
22-20oC freezerRuey ShingRS-S3007F75,000Sample preservation
23-80oC freezerNuaireNU-6382G400,000Sample preservation
  • Moored Biogeochemical Sensor Automated Monitoring System: The ocean buoy system is capable of observing surface meteorological conditions alongside the physical, chemical, and biological properties of the upper ocean, utilizing satellite communication to transmit data back to the control center in real-time. During the first year of the project, a budget was allocated to commission the National Taiwan University (NTU) Physical Oceanography team to assemble the mooring system. The subsurface instrument payload will include dissolved oxygen, pH, turbidity (suspended particulate matter), and chlorophyll fluorescence sensors, among others. Funding for the second year and beyond will be contingent upon performance milestones and evaluation results.
  • Organic Carbon Export (Blue Carbon) Parameters: This component is supported by the Taiwan Ocean Research Institute (TORI) of the National Applied Research Laboratories (NARLabs). TORI provides sediment trap deployment and analysis services, utilizing its two annual research cruises aboard the R/V Legend to conduct marine blue carbon investigations at the SEATS station.

Ocean Data Bank (ODB)

In 1987, the National Science and Technology Council (NSTC) commissioned the Institute of Oceanography at National Taiwan University to establish and operate the “Hydrological Database” as a funded project, which was later renamed the Ocean Data Bank (ODB). Currently, the ODB archives and consolidates oceanographic cruise data from various domestic research vessels, including the New Ocean Researcher 1, 2, and 3; Ocean Researcher I, II, and III; Fishery Researcher 1 (partial datasets); and Ocean Researcher V (data from its first two years of operation). The database has also progressively integrated observation data from various marine mooring systems.

Data application and acquisition procedures are conducted in accordance with the ODB’s existing regulations and protocols. For further details, please visit the official website at https://www.odb.ntu.edu.tw/. Tai-MOS core scientists, postdoctoral researchers, and cruise-participating research teams are exempt from the standard two-year data moratorium. Upon approval by the Scientific Steering Committee, they will have priority access to the latest cruise datasets collected within the past two years.

Tai-MOS SEATS Cruise Project and Application

Continue the legacy of the SEATS project, this project designates the SEATS deep-water station in the northern South China Sea (18 oN; 116 oE) as the primary baseline station for the Tai-MOS Core Project. The program conducts four seasonal research cruises each year, including two cruises scheduled and funded directly by this project, and two cruises coordinated through existing sediment trap cruises operated by TORI. Each cruise has a duration of 10–12 days. To capture high-frequency biogeochemical dynamics within the water column, this project employs high-frequency, fixed-point sampling operations. This involves sampling the upper water column every 3 hours over a 24-to-36-hour period while on station. This intensive sampling design emphasizes the significance of short-term, rapid biogeochemical processes. To apply for cruise participation, please complete the “SEATS Cruise Application Form” and submit it to the Tai-MOS Core Project Office coordinator by the end of April each year.